extract-clinical-entities-to-fhir
Skill by maziyarpanahi · updated · ★ 5.7k
Extract clinical entities from synthetic or already de-identified text with OpenMed and map them into deterministic FHIR R4 resources and a Bundle. Use when an agent must turn local clinical NER output into Conditions, MedicationStatements, Observations, or other FHIR resources without inventing terminology codes. extract-clinical-entities-to-fhir is published by maziyarpanahi on GitHub.
Install extract-clinical-entities-to-fhir
Built from the published package, never by AIgit clone --depth 1 https://github.com/maziyarpanahi/openmed /tmp/openmed && mkdir -p ~/.claude/skills && cp -r /tmp/openmed/skills/extract-clinical-entities-to-fhir ~/.claude/skills/extract-clinical-entities-to-fhirRun in your terminal. Claude Code loads skills from ~/.claude/skills automatically.
Step-by-step: install extract-clinical-entities-to-fhir in Claude Code
git clone --depth 1 https://github.com/maziyarpanahi/openmed /tmp/openmed && mkdir -p ~/.gemini/antigravity-cli/skills && cp -r /tmp/openmed/skills/extract-clinical-entities-to-fhir ~/.gemini/antigravity-cli/skills/extract-clinical-entities-to-fhirAntigravity CLI loads skills from ~/.gemini/antigravity-cli/skills, or .agents/skills for one project.
Step-by-step: install extract-clinical-entities-to-fhir in Antigravity CLI
Skills can run scripts on your machine. Some need an API key: check the README.
Last commit in the past day
Apache-2.0: permissive, fine for commercial use
Clear description, installs from GitHub, 5,704 stars, original repository
No risky patterns in the files we checked
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Security check
ANo download-and-run commands, hidden instructions or signs of sending keys out were found.
Checked automatically: skills/extract-clinical-entities-to-fhir/SKILL.md. This looks for known risky patterns and is not a full audit. How grades work
Inside the skill
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SKILL.md4 KB
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extract-clinical-entities-to-fhir: common questions
How do I install extract-clinical-entities-to-fhir?
Run the command above to copy the skill into ~/.claude/skills/. Claude Code picks it up automatically.
Is extract-clinical-entities-to-fhir free?
The code is published under the Apache-2.0 licence. The service it connects to may have its own pricing.
Is extract-clinical-entities-to-fhir safe to use?
It scores 84 of 100. Grades: maintenance A, licence A, quality A. Security check: grade A, no risky patterns found in the files checked. Review the code before you install. How grades work.
What are alternatives to extract-clinical-entities-to-fhir?
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