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alphafold-database-fetch-and-analyze

Skill by google-deepmind · updated · ★ 3.3k

Score 91

Retrieve and analyze AlphaFold predicted structures for a protein. Use when the user provides a specific UniProt Accession ID and wants structural confidence metrics (pLDDT), domain boundary analysis, or disorder assessment. Do not use if the user only has a protein name, gene name, or amino acid sequence — ask for a UniProt ID first. alphafold-database-fetch-and-analyze is published by google-deepmind on GitHub.

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Works withClaude CodeClaude apps Antigravity CLI

Install alphafold-database-fetch-and-analyze

Built from the published package, never by AI
git clone --depth 1 https://github.com/google-deepmind/science-skills /tmp/science-skills && mkdir -p ~/.claude/skills && cp -r /tmp/science-skills/skills/alphafold_database_fetch_and_analyze ~/.claude/skills/alphafold-database-fetch-and-analyze

Run in your terminal. Claude Code loads skills from ~/.claude/skills automatically.

Step-by-step: install alphafold-database-fetch-and-analyze in Claude Code

Skills can run scripts on your machine. Some need an API key: check the README.

Maintenance

Last commit in the past day

Licence

Apache-2.0: permissive, fine for commercial use

Quality

Clear description, installs from GitHub, 3,326 stars, original repository

Security

No risky patterns in the files we checked

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Security check

A

No download-and-run commands, hidden instructions or signs of sending keys out were found.

Checked automatically: skills/alphafold_database_fetch_and_analyze/SKILL.md, skills/alphafold_database_fetch_and_analyze/scripts/analyze_pae.py, skills/alphafold_database_fetch_and_analyze/scripts/analyze_plddt.py, skills/alphafold_database_fetch_and_analyze/scripts/fetch_structure.py. This looks for known risky patterns and is not a full audit. How grades work

Inside the skill

  • SKILL.md5 KB
  • references/citation.bib10 KB
  • scripts/analyze_pae.py6 KB
  • scripts/analyze_plddt.py4 KB
  • scripts/fetch_structure.py5 KB

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alphafold-database-fetch-and-analyze: common questions

How do I install alphafold-database-fetch-and-analyze?

Run the command above to copy the skill into ~/.claude/skills/. Claude Code picks it up automatically.

Is alphafold-database-fetch-and-analyze free?

The code is published under the Apache-2.0 licence. The service it connects to may have its own pricing.

Is alphafold-database-fetch-and-analyze safe to use?

It scores 91 of 100. Grades: maintenance A, licence A, quality A. Security check: grade A, no risky patterns found in the files checked. Review the code before you install. How grades work.

What are alternatives to alphafold-database-fetch-and-analyze?

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