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tooluniverse

Community

MCP server by mims-harvard · updated · ★ 1.7k

Score 90

2,700+ scientific tools for AI scientists: life science, research, literature, and more. tooluniverse is a community project by mims-harvard, not verified by a company domain.

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Maintenance

Last commit 4 days ago

Licence

Apache-2.0: permissive, fine for commercial use

Quality

Clear description, published package or server URL, 1,747 stars, original repository

Security

Downloads a script from the internet and runs it (a well-known installer)

What you need

SettingNeededWhat it is
OPENAI_API_KEYEnvironment variable, secretOptionalOpenAI API key for LLM-based tool finding and embedding features
ANTHROPIC_API_KEYEnvironment variable, secretOptionalAnthropic API key for Claude-based features
GEMINI_API_KEYEnvironment variable, secretOptionalGoogle Gemini API key for Gemini-based features
OPENROUTER_API_KEYEnvironment variable, secretOptionalOpenRouter API key for accessing 100+ LLM models
AZURE_OPENAI_API_KEYEnvironment variable, secretOptionalAzure OpenAI API key (alternative to OpenAI)
HF_TOKENEnvironment variable, secretOptionalHuggingFace token for accessing models and datasets
NCBI_API_KEYEnvironment variable, secretOptionalNCBI/PubMed API key for higher rate limits (10 req/sec vs 3 req/sec). Register at https://www.ncbi.nlm.nih.gov/account/
SEMANTIC_SCHOLAR_API_KEYEnvironment variable, secretOptionalSemantic Scholar API key for higher rate limits (100 req/sec vs 1 req/sec). Register at https://www.semanticscholar.org/product/api
BIOGRID_API_KEYEnvironment variable, secretOptionalBioGRID API key for protein-protein interaction queries. Register free at https://webservice.thebiogrid.org/
DISGENET_API_KEYEnvironment variable, secretOptionalDisGeNET API key for gene-disease association data. Register free at https://www.disgenet.org/
OMIM_API_KEYEnvironment variable, secretOptionalOMIM API key for Mendelian disease data. Register at https://omim.org/api
ONCOKB_API_TOKENEnvironment variable, secretOptionalOncoKB API token for precision oncology annotations. Register at https://www.oncokb.org/apiAccess
NVIDIA_API_KEYEnvironment variable, secretOptionalNVIDIA NIM API key for AlphaFold2 structure prediction, molecular docking, and genomics tools. Get key at https://build.nvidia.com
USPTO_API_KEYEnvironment variable, secretOptionalUSPTO API key for patent data access. Register at https://developer.uspto.gov/
UMLS_API_KEYEnvironment variable, secretOptionalUMLS API key for medical terminology and concept mapping. Register at https://uts.nlm.nih.gov/uts/
BRENDA_EMAILEnvironment variableOptionalBRENDA enzyme database login email. Register at https://www.brenda-enzymes.org/
BRENDA_PASSWORDEnvironment variable, secretOptionalBRENDA enzyme database login password

From the publisher's entry in the official MCP Registry. Required settings are already in the install config below as placeholders.

Install tooluniverse

Built from the published package, never by AI
claude mcp add tooluniverse -- uvx tooluniverse

Run in your terminal. Add --scope user to use it in every project.

Step-by-step: install tooluniverse in Claude Code

MCP servers run with your permissions and can read what you give them access to. Some need an API key: check the README and add it under env in the tooluniverse block.

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Security check

B
  • Downloads a script from the internet and runs it (a well-known installer)In README.md: curl -LsSf https://astral.sh/uv/install.sh | sh

Checked automatically: README.md. This looks for known risky patterns and is not a full audit. How grades work

Alternatives to tooluniverse

All alternatives →

tooluniverse: common questions

How do I install tooluniverse?

In Claude Code run claude mcp add tooluniverse -- uvx tooluniverse. For Claude Desktop, Cursor and VS Code, paste the config shown above and restart. See the install guides.

Is tooluniverse the official server?

tooluniverse is a community project by mims-harvard, not verified by a company domain.

Is tooluniverse free?

The code is published under the Apache-2.0 licence. The service it connects to may have its own pricing.

Is tooluniverse safe to use?

It scores 90 of 100. Grades: maintenance A, licence A, quality A. Security check: grade B (downloads a script from the internet and runs it (a well-known installer)). Review the code before you install. How grades work.

What are alternatives to tooluniverse?

Similar MCP servers: exa, Agent Skills Search Server, brave, Atlassian Rovo MCP Server.

Does tooluniverse work with ChatGPT?

Not directly. It runs locally, and ChatGPT only connects to remote servers with a URL. Use it in Claude Code, Claude Desktop, Cursor, VS Code or Codex.

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