AI Plugin IndexProtein MCP Server vs Jay Code
Protein MCP Server and Jay Code are both science and health MCP servers. Jay Code scores higher (94 vs 78 out of 100). Jay Code has more GitHub stars (78k), and Jay Code was updated more recently (3 days ago). The table compares them side by side.
| Protein MCP Server | Jay Code | |
|---|---|---|
| Score | 78 / 100 | 94 / 100 |
| What it does | Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models via MCP. STDIO or Streamable HTTP. | Streamlined AI CLI orchestration engine with mathematical rigor and enterprise-grade reliability |
| Publisher | Verified: npm:@cyanheads | Verified: npm:jay-code |
| Grades | Maintenance A, Licence A, Quality C | Maintenance A, Licence A, Quality A |
| npm downloads a week | 334 | 229 |
| Runs | Local | Local |
| Works with | Claude Code, Claude Desktop, Cursor, Codex, Gemini CLI, VS Code, Windsurf | Claude Code, Claude Desktop, Cursor, Codex, Gemini CLI, VS Code, Windsurf |
| GitHub stars | 6 | 77,500 |
| Last commit | 17 Oct 2026 | 20 Oct 2026 |
| Licence | Apache-2.0 | MIT |
| Listed since | 20 Oct 2026 | 20 Oct 2026 |
| Install Protein MCP Server | Install Jay Code |
Questions
Is Protein MCP Server or Jay Code more popular?
Jay Code has more GitHub stars: 77,500.
Can I use Protein MCP Server and Jay Code together?
Yes. AI assistants can load several MCP servers at once. Install both and the assistant picks the right one for each task.