AI Plugin IndexProtein MCP Server vs codescene-mcp-server
Protein MCP Server and codescene-mcp-server are both science and health MCP servers. codescene-mcp-server scores higher (84 vs 78 out of 100). codescene-mcp-server has more GitHub stars (71), and codescene-mcp-server was updated more recently (4 days ago). The table compares them side by side.
| Protein MCP Server | codescene-mcp-server | |
|---|---|---|
| Score | 78 / 100 | 84 / 100 |
| What it does | Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models via MCP. STDIO or Streamable HTTP. | An MCP server that provides CodeScene Code Health analysis tools. |
| Publisher | Verified: npm:@cyanheads | Verified: codescene.com |
| Grades | Maintenance A, Licence A, Quality C | Maintenance A, Licence F, Quality B |
| npm downloads a week | 316 | 1,988 |
| Runs | Local | Local |
| Works with | Claude Code, Claude Desktop, Cursor, Codex, Gemini CLI, VS Code, Windsurf | Claude Code, Claude Desktop, Cursor, Codex, Gemini CLI, VS Code, Windsurf |
| GitHub stars | 6 | 71 |
| Last commit | 17 Oct 2026 | 19 Oct 2026 |
| Licence | Apache-2.0 | NOASSERTION |
| Listed since | 20 Oct 2026 | 19 Oct 2026 |
| Install Protein MCP Server | Install codescene-mcp-server |
Questions
Is Protein MCP Server or codescene-mcp-server more popular?
codescene-mcp-server has more GitHub stars: 71.
Can I use Protein MCP Server and codescene-mcp-server together?
Yes. AI assistants can load several MCP servers at once. Install both and the assistant picks the right one for each task.